Gene

rabgef1l

ID
ZDB-GENE-040426-813
Name
RAB guanine nucleotide exchange factor (GEF) 1, like
Symbol
rabgef1l Nomenclature History
Previous Names
  • rabgef1
  • zgc:55834 (1)
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have DNA binding activity and zinc ion binding activity. Orthologous to human RABGEF1 (RAB guanine nucleotide exchange factor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rabgef1l Human Ortholog
No data available
Associated With rabgef1l Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002653 Zinc finger, A20-type
Domain IPR003123 VPS9 domain
Domain IPR041545 RABX5, catalytic core helical domain
Family IPR045046 Vacuolar protein sorting-associated protein 9-like
Homologous_superfamily IPR037191 VPS9 domain superfamily
Domain Details Per Protein
Protein Length RABX5, catalytic core helical domain Vacuolar protein sorting-associated protein 9-like VPS9 domain VPS9 domain superfamily Zinc finger, A20-type
UniProtKB:Q7ZVP0 470
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rabgef1l-201 (1) Ensembl 2,097 nt
mRNA rabgef1l-202 (1) Ensembl 582 nt
ncRNA rabgef1l-003 (1) Ensembl 581 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations